I searched the forum to make sure this hasn't been done before. These are Prince's charted singles on the Billboard Hot 100, R&B, AC, album rock and Modern rock charts. All info is from Joel Whitburn's excellent chart books. The UK info is from the Guiness book of British hit singles. Keep in mind the pop book(both US and UK) and R&B book I have only goes to 1999. The AC book only goes to 1996 and the album rock/Modern rock book only goes to 1995. The year given after a song title is the year the single reached it's peak.

US Hot 100:

#92 Soft and wet 1978
#11 I wanna be your lover 1980
#70 Controversy 1981
#12 1999 1983
#6 Little red corvette 1983
#8 Delirious 1983
#52 Let's pretend we're married/Iresistible bitch 1984
#1 When doves cry 1984
#1 Let's go crazy 1984
#2 Purple rain 1984
#8 I would die 4 u 1984
#5 (Christmas charts) Another lonely Christmas 1985
#25 Take me with u 1985
#2 Raspberry beret 1985
#7 Pop life 1985
#46 America 1985
#1 Kiss 1986
#23 Mountains 1986
#63 Anotherloverholenyohead 1986
#3 Sign o' the times 1987
#67 If I was your girlfriend 1987
#2 U got the look 1987
#10 I could never take the place of your man 1988
#63 Hot thing 1988
#8 Alphabet street 1988
#1 Batdance 1989
#18 Partyman 1989
#36 The arms of Orion 1989
#6 Thieves in the temple 1990
#64 New power generation 1990
#21 Gett off 1991
#1 Cream 1991
#3 Diamonds and pearls 1992
#77 Insatiable 1992
#23 Money don't matter 2night 1992
#66 Sexy MF 1992
#36 My name is Prince 1992
#7 7 1993
#44 The morning papers 1993
#50 Pink cashmere 1993
#3 The most beautiful girl in the world 1994
#72 (air play charts) Love sign 1994
#31 Letitgo 1994
#84 Purple medley 1995
#12 I hate u 1995
#88 Gold 1995
#31 (air play) Betcha by golly wow 1996
#58 (air play) The holy river 1997
#40 1999 1999
#63 The greatest romance ever sold 1999

Bubbling under charts:

#101 Uptown 1980
#104 Let's work 1981
#108 Damn u 1993
#107 Peach 1993

UK charts:

#41 I wanna be your lover 1980
#25 1999 1983
#54 Little red corvette 1983
#66 Little red corvette (re-issue) 1983
#4 When doves cry 1984
#8 Purple rain 1984
#58 I would die 4 u 1984
#2 1999/Little red corvette (re-issue) 1985
#7 Let's go crazy/Take me with u 1985
#18 Paisley park 1985
#25 Raspberry beret 1985
#60 Pop life 1985
#6 Kiss 1986
#45 Mountains 1986
#11 Girls and boys 1986
#36 Anotherloverholenyohead 1986
#10 Sign o' the times 1987
#20 If I was your girlfriend 1987
#11 U got the look 1987
#29 I could never take the place of your man 1987
#9 Alphabet st 1988
#29 Glam slam 1988
#24 I wish u heaven 1988
#2 Batdance 1989
#14 Partyman 1989
#27 The arms of Orion 1989
#7 Thieves in the temple 1990
#26 New power generation 1990
#4 Gett off 1991
#15 Cream 1991
#25 Diamonds and pearls 1991
#19 Money don't matter 2night 1992
#28 Thunder 1992
#4 Sexy MF/Strollin' 1992
#7 My name is Prince 1992
#51 My name is Prince (re-mix) 1992
#27 7 1992
#52 The morning papers 1993
#14 Peach 1993
#5 Controversy (re-issue) 1993
#1 The most beautiful girl in the world 1994
#18 The beautiful experience (re-mix) 1994
#30 Letitgo 1994
#33 Purple medley 1995
#20 I hate u 1995
#10 Gold 1995
#36 Dinner with Delores 1996
#11 Betcha by golly wow 1996
#19 The holy river 1997
#10 1999 (re-issue) 1999
#51 1999 (re-entry of re-issue) 1999

R&B charts:

#12 Soft and wet 1978
#91 Just as long as we're together 1979
#1 I wanna be your lover 1979
#13 Why you wanna treat me so bad 1980
#65 Still waiting 1980
#5 Uptown 1980
#65 Dirty mind 1981
#3 Controversy 1981
#9 Let's work 1982
#4 1999 1982
#15 Little red corvette 1983
#18 Delirious 1983
#55 Let's pretend we're married/Irresistible bitch 1984
#1 When doves cry 1984
#1 Let's go crazy 1984
#4 Purple rain 1984
#11 I would die 4 u 1985
#40 Take me with u 1985
#3 Raspberry beret 1985
#8 Pop life 1985
#35 America 1985
#1 Kiss 1986
#15 Mountains 1986
#18 Anotherloverholenyohead 1986
#1 Sign o' the times 1987
#12 If I was your girlfriend 1987
#11 U got the look 1987
#14 Hot thing 1988
#3 Alphabet st 1988
#44 Glam slam 1988
#18 I wish u heaven 1988
#1 Batdance 1989
#5 Partyman 1989
#5 Scandalous 1990
#1 Thieves in the temple 1990
#27 New power generation 1990
#6 Gett off 1991
#3 Insatiable 1992
#1 Diamonds and pearls 1992
#14 Money don't matter 2night 1992
#76 Sexy MF 1992
#25 My name is Prince 1992
#32 Damn u 1993
#61 7 1993
#68 The morning papers 1993
#14 Pink cashmere 1993
#62 Nothing compares 2 u 1994
#2 The most beautiful girl in the world 1994
#32 (air play) Love sign 1994
#62 (air play) Shhh 1994
#10 Letitgo 1994
#71 Space 1994
#74 Purple medley 1995
#3 I hate u 1995
#92 Gold 1996
#78 Girl 6 1996
#10 (air play) Betcha by golly wow 1996
#15 (air play) Somebody's somebody 1997
#44 (air play) The one 1998
#45 1999 1999

Adult contemporary charts:

#21 The arms of Orion 1989
#40 Diamonds and pearls 1992
(I know "Betcha by golly wow" charted AC but like I said, my book only goes to 1996)

Album rock charts:

#17 Little red corvette 1983
#31 When doves cry 1984
#19 Let's go crazy 1984
#18 Purple rain
#40 Raspberry beret 1985

Modern rock charts:

#18 Batdance 1989

If you're interested I have the complete Swiss, German, French and Dutch charts,
lemme know